Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature. 2005 Dec 22;438(7071):1105-15. Galagan JE et.al.
Supplementary genomic material
- Detailed Methods:
A. nidulans Sequencing and Assembly.
- Aspergillus Phylogenetic Analysis - Raw Data (Excel file)
- Synteny Analysis
- Upstream open reading frames (uORFs) (Excel file)
- Conserved Non-Coding conpats (Excel file)
- Transposable Elements
- Assembly and Genetic Map Integration
Table §S8.1 Enzymes involved in fatty acid beta-oxidation in
- Hyphal Growth.
Table §S9.1. Rho GTPases in Aspergillus fumigatus, Aspergillus nidulans and Aspergillus oryzae.
- Gene Prediction Protocol and Accuracy Estimation
- Genes Implicated In Sexual Reproduction in Fungi
- Two Predicted TPP Riboswitches
- Aspergillus nidulans Comparative Map
Aspergillus nidulans Genome Database at The Broad Institute
- TIGR Aspergillus nidulans Gene Index
The TIGR Aspergillus nidulans Gene Index integrates research data from international Aspergillus nidulans EST sequencing and gene research projects. The goal of the project is to represent a non-redundant view of all Aspergillus nidulans genes and data on their expression patterns, cellular roles, functions, and evolutionary relationships.
The Cereon Microbial Sequence
This site provides access to proprietary genome sequence data for Aspergillus
nidulans for researchers at academic and non-profit institutions.
Genomics website (Nancy Keller, Misawa, Rolf Prade and Bruce Roe)
This site contains the Aspergillus nidulans chromosome IV
sequence database, the A. nidulans EST database and the A.
nidulans physical maps.
The Aspergillus nidulans Linkage Map at the University
of Glasgow (John Clutterbuck)
Linkage Data, Maps, Locus Lists, Strain list and Annual Bibliographies
- Fungal Cosmid and
cDNA Sequencing at Oklahoma University
This site contains the sequence of cosmids from Aspergillus nidulans,
A. parasiticus and Neurospora crassa. It contains A.
nidulans and N. crassa EST databases which are searchable
of Genomes and Transcriptional Regulation for Filamentous Fungi
at the NIBH, Japan (Masayuki Machida)
This site contains the Aspergillus oryzae EST database and
the sequence of a single A. nidulans cosmid SW06H01.
- Fungal Genome Resource
at the University of Georgia (Jonathan Arnold)
This site contains physical maps of Aspergillus nidulans,
Neurospora crassa, Nectria haematococca and Pneumocystis
carinii. It contains databases of N. crassa and P. carinii
cosmid end sequence and P. carinii ESTs which are searchable